Bioinformatics Infrastructure Developer
14 hours ago
Join the Department of Veterinary and Animal Sciences at the University of Copenhagen as a Data Scientist and contribute to the development of cutting-edge bioinformatics infrastructure. We are seeking a highly motivated and skilled professional to tackle complex data integration challenges in the field of bioinformatics.
Job OverviewAs a Data Scientist, you will play a key role in developing innovative solutions to integrate diverse and heterogeneous datasets from various sources. Your primary focus will be on leveraging Large Language Models (LLMs) to enable seamless data integration workflows, with a strong emphasis on scalability and intelligence.
Key Responsibilities:- Develop and implement LLM-based data integration solutions
- Collaborate with ELIXIR-related bioinformaticians to evaluate integrated data resources and their applicability
- Manage and maintain data storage solutions and computational infrastructure for bioinformatics workflows
- Ensure advancements in LLM applications are incorporated into the infrastructure
- Document implementations, pipelines, methods, and infrastructure configurations
We are looking for a candidate with a strong background in bioinformatics, computer science, or a related field. Essential experience and skills include:
- Master's degree in bioinformatics, computer science, or a similar area
- Highly experienced in Python and R programming languages
- Strong experience with Linux/Unix environment, command lines, and shell scripting
- Experience with running local LLMs, ideally through frameworks such as LangChain or LlamaIndex
- Machine learning expertise
- Familiarity with omics data analysis and data standards & API systems
- Excellent English language skills
Desirable experience and skills include a PhD degree, professional qualifications relevant to the position, relevant work experience, publications, and creativity.
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