Proteomics Data Science Expert
3 days ago
Job Description:
We are seeking a skilled Proteomics Data Science Expert to join our team at DTU Bioengineering. In this role, you will specialize in the analysis of proteomics data, applying your expertise in data science, cloud computing, machine learning, and bioinformatics to support cutting-edge research across the department and with industry partners.
As a core member of our interdisciplinary team, you will work closely with the DTU Proteomics Core and be affiliated with the Data Science Hub, providing analytical support for both internal and external projects. The DTU Proteomics Core is a well-established facility, offering state-of-the-art mass spectrometry-based proteomics analysis for academia and industry.
Your primary mission will be to deliver tailored bioinformatics services, develop robust data analysis pipelines for proteomics, and deploy solutions to the cloud to enhance the research capabilities of the DTU Proteomics Core facility and the department. Additionally, you will lead educational initiatives, promoting bioinformatics and proteomics literacy to empower researchers across DTU Bioengineering.
This role is essential in linking diverse research groups, positioning you at the forefront of innovative proteomics and data science applications. You will act as a consultant to guide and shape the formulation of research questions and experimental design, applying a creative and out-of-the-box approach to solve complex scientific challenges.
You will be engaged in a fast-paced, top-tier research environment that encourages innovative thinking and the pursuit of transformative solutions. Your contributions will drive meaningful research in biotechnology, systems biology, and related fields, working with a dedicated team of proteomics experts and data scientists to pioneer new discoveries and solutions.
Key Responsibilities:
- Develop and implement bioinformatics strategies for proteomics support, including the creation of analysis pipelines and educational programs to boost department-wide bioinformatics and proteomics literacy.
- Collaborate with scientists and industry to conceptualize and execute proteomics-focused projects, ensuring optimal data utilization and analysis.
- Provide consultation on data generated from proteomics projects, aiding researchers in their pursuits or independently managing projects when necessary.
- Assist with bioinformatics tool deployment and maintain the department's growing cloud infrastructure.
- Stay current with emerging technologies in data science, proteomics, and cloud development.
Required Skills and Qualifications:
- PhD or Master's degree and equivalent experience in fields like data science, bioinformatics, systems biology, biotechnology, or related disciplines.
- Strong experience with mass spectrometry and proteomics data analysis is preferred, including functional and gene enrichment analysis, handling PTMs and peptide-level data.
- Proficiency in machine learning and dimensionality reduction techniques applicable to proteomics data.
- Familiarity with systems biology tools and solid foundation in statistical approaches for biological data analysis.
- Experience with workflow management systems like Snakemake or Nextflow for reproducible pipelines and experience or interest in cloud computing and tool deployment for bioinformatics solutions.
- Proficiency in Python programming and experience with Git for version control and working knowledge of Unix/Linux operating systems.
- Enthusiasm for multidisciplinary and collaborative research, good interpersonal skills, and the ability to work effectively in an international team and manage multiple projects simultaneously.
- Proficiency in English, both oral and written, and excellent communication and presentation skills.
Benefits:
We offer an interesting and challenging job in an international atmosphere with the focus on research, teaching, innovation, and scientific advice for the benefit of the surrounding community. We place emphasis on a high level of professionalism among our staff, so skills development is an integral part of our organization. We offer great flexibility in the position. In the area of technical and natural sciences, DTU is one of the leading research and education institutions in Europe.
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